Table 4 Number of genes associated with general COG functional categories

J

213

6.47

213

6.47

197

Translation, ribosomal structure and biogenesis

A

0

0

0

0

0

RNA processing and modification

K

313

9.51

310

9.41

259

Transcription

L

166

5.04

168

5.10

103

Replication, recombination and repair

B

0

0

0

0

0

Chromatin structure and dynamics

D

49

1.48

48

1.45

33

Cell cycle control, Cell division, chromosome partitioning

V

92

2.79

92

2.79

76

Defense mechanisms

T

106

3.22

104

3.15

86

Signal transduction mechanisms

M

186

5.65

184

5.58

158

Cell wall/membrane biogenesis

N

22

0.66

22

0.66

10

Cell motility

U

26

0.79

26

0.78

17

Intracellular trafficking and secretion

O

99

3.01

100

3.03

83

Posttranslational modification, protein turnover, chaperones

C

118

3.58

118

3.58

101

Energy production and conversion

G

286

8.69

286

8.68

265

Carbohydrate transport and metabolism

E

218

6.62

219

6.65

183

Amino acid transport and metabolism

F

103

3.13

104

3.15

89

Nucleotide transport and metabolism

H

116

3.52

116

3.52

86

Coenzyme transport and metabolism

I

97

2.94

96

2.91

80

Lipid transport and metabolism

P

121

3.67

121

3.67

105

Inorganic ion transport and metabolism

Q

19

0.57

20

0.60

23

Secondary metabolites biosynthesis, transport and catabolism

R

189

5.74

189

5.74

174

General function prediction only

S

235

7.14

236

7.16

201

Function unknown

X

94

2.85

97

2.94

55

Mobilome: prophages, transposons

-

421

12.80

424

12.87

-

Not in COGs