Fig. 5
Alignments (using progressive Mauve software) of STM3625 megaplasmid P1 (A1) and pSym (B1) with draft genomes of R. mesoamericanum isolates STM6155 (A2, B2) and CCGE501T (A3, B3). The linked blocks in the alignment represent the common local colinear blocks (LCBs) among the compared genomes and homologous blocks among genomes are shown as identically colored regions. The red lines in A1 and B1 represent plasmid P1 boundaries (only P1 is shown), while in A2, B2, A3 and B3 they represent contigs boundaries (only homologous contigs to P1/pSym are shown)