Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 7,569,109 | 100.00 |
DNA coding (bp) | 6,849,121 | 90.49 |
DNA G + C (bp) | 4,113,347 | 54.34 |
DNA scaffolds | 1 | 100.00 |
Total genes | 6,463 | 100.00 |
Protein coding genes | 6,406 | 99.12 |
RNA genes | 57 | 0.88 |
Pseudogenes | not determined | not determined |
Genes in internal clusters | 1,494 | 23.12 |
Genes with function prediction | 4,051 | 62.68 |
Genes assigned to COGs | 2,938 | 45.46 |
Genes with Pfam domains | 4,268 | 66.04 |
Genes with signal peptides | 1,084 | 16.77 |
Genes with transmembrane helices | 1,393 | 21.55 |
CRISPR repeats | 8 |