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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequence of Micromonospora sp. DSW705 and distribution of biosynthetic gene clusters for depsipeptides bearing 4-amino-2,4-pentadienoate in actinomycetes

Code Value % age Description
J 234 4.8 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 606 12.5 Transcription
L 285 5.9 Replication, recombination and repair
B 2 0.04 Chromatin structure and dynamics
D 63 1.3 Cell cycle control, Cell division, chromosome partitioning
V 125 2.6 Defense mechanisms
T 315 6.5 Signal transduction mechanisms
M 281 5.8 Cell wall/membrane biogenesis
N 37 0.76 Cell motility
U 77 1.6 Intracellular trafficking and secretion
O 174 3.6 Posttranslational modification, protein turnover, chaperones
C 345 7.1 Energy production and conversion
G 475 9.8 Carbohydrate transport and metabolism
E 587 12.1 Amino acid transport and metabolism
F 110 2.2 Nucleotide transport and metabolism
H 221 4.5 Coenzyme transport and metabolism
I 277 5.7 Lipid transport and metabolism
P 344 7.1 Inorganic ion transport and metabolism
Q 282 5.8 Secondary metabolites biosynthesis, transport and catabolism
R 984 20.3 General function prediction only
S 457 9.4 Function unknown
- 1,373 28.3 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome