Table 4 Genome statistics
Attribute | P. jessenii C2 | P. jessenii H16 | ||
|---|---|---|---|---|
Value | % of total | Value | % of total | |
Genome size (bp) | 6,420,113 | 100.00 | 6,807,788 | 100.00 |
DNA coding (bp) | 5,484,120 | 85.42 | 5,835,906 | 85.72 |
DNA G+C (bp) | 3,851,154 | 59.83 | 4,017,956 | 59.02 |
DNA scaffolds | 64 | - | 78 | - |
Total genes | 5881 | 100.00 | 6065 | 100.00 |
Protein coding genes | 5814 | 98.86 | 5995 | 98.85 |
RNA genes | 67 | 1.14 | 70 | 1.15 |
Pseudo genes | ||||
 Genes with function prediction | 5179 | 88.06 | 5344 | 88.11 |
 Genes assigned to COGs | 4314 | 73.75 | 4354 | 71.79 |
 Genes with Pfam domains | 3595 | 61.13 | 3587 | 59.14 |
 Genes with signal peptides | 510 | 8.67 | 537 | 8.85 |
 Genes with transmembrane helices | 1260 | 21.42 | 1343 | 22.14 |
 CRISPR repeats | 38 | - | 11 | - |