Skip to main content

Advertisement

Table 3 Genome statistics

From: High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1T, a gammaproteobacterium isolated from estuarine sediment

Attribute Value % of Totala
Genome size (bp) 4,588,530 100.00
DNA coding (bp) 4,041,165 88.07
DNA G + C (bp) 2,597,447 56.61
DNA scaffolds 37 100.00
Total genesb 4331 100.00
Protein coding genes 4276 98.73
RNA genes 55 1.27
Genes with function prediction 3440 79.43
Genes assigned to COGs 2832 65.39
Genes with Pfam domains 3595 83.01
Genes with signal peptides 383 8.84
Genes with transmembrane helices 1143 26.39
CRISPR repeats 1 -
  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
  2. b no pseudogenes found