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Table 3 Genome statistics

From: High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1T, a gammaproteobacterium isolated from estuarine sediment

Attribute

Value

% of Totala

Genome size (bp)

4,588,530

100.00

DNA coding (bp)

4,041,165

88.07

DNA G + C (bp)

2,597,447

56.61

DNA scaffolds

37

100.00

Total genesb

4331

100.00

Protein coding genes

4276

98.73

RNA genes

55

1.27

Genes with function prediction

3440

79.43

Genes assigned to COGs

2832

65.39

Genes with Pfam domains

3595

83.01

Genes with signal peptides

383

8.84

Genes with transmembrane helices

1143

26.39

CRISPR repeats

1

-

  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
  2. b no pseudogenes found