Skip to main content

Table 4 Number of genes associated with general COG functional categories

From: Complete genome sequence of Pseudomonas citronellolis P3B5, a candidate for microbial phyllo-remediation of hydrocarbon-contaminated sites

Code Value % age Description
J 189 3.11 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 480 7.91 Transcription
L 180 2.96 Replication, recombination and repair
B 5 0.08 Chromatin structure and dynamics
D 40 0.66 Cell cycle control, Cell division, chromosome partitioning
V 75 1.24 Defense mechanisms
T 286 4.71 Signal transduction mechanisms
M 281 4.63 Cell wall/membrane biogenesis
N 114 1.88 Cell motility
U 79 1.30 Intracellular trafficking and secretion
O 182 3.00 Posttranslational modification, protein turnover, chaperones
C 417 6.87 Energy production and conversion
G 196 3.23 Carbohydrate transport and metabolism
E 489 8.05 Amino acid transport and metabolism
F 112 1.84 Nucleotide transport and metabolism
H 160 2.64 Coenzyme transport and metabolism
I 218 3.59 Lipid transport and metabolism
P 349 5.74 Inorganic ion transport and metabolism
Q 142 2.34 Secondary metabolites biosynthesis, transport and catabolism
R 0 0.00 General function prediction only
S 1528 25.17 Function unknown
- 548 9.03 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome