Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 189 | 3.11 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 480 | 7.91 | Transcription |
L | 180 | 2.96 | Replication, recombination and repair |
B | 5 | 0.08 | Chromatin structure and dynamics |
D | 40 | 0.66 | Cell cycle control, Cell division, chromosome partitioning |
V | 75 | 1.24 | Defense mechanisms |
T | 286 | 4.71 | Signal transduction mechanisms |
M | 281 | 4.63 | Cell wall/membrane biogenesis |
N | 114 | 1.88 | Cell motility |
U | 79 | 1.30 | Intracellular trafficking and secretion |
O | 182 | 3.00 | Posttranslational modification, protein turnover, chaperones |
C | 417 | 6.87 | Energy production and conversion |
G | 196 | 3.23 | Carbohydrate transport and metabolism |
E | 489 | 8.05 | Amino acid transport and metabolism |
F | 112 | 1.84 | Nucleotide transport and metabolism |
H | 160 | 2.64 | Coenzyme transport and metabolism |
I | 218 | 3.59 | Lipid transport and metabolism |
P | 349 | 5.74 | Inorganic ion transport and metabolism |
Q | 142 | 2.34 | Secondary metabolites biosynthesis, transport and catabolism |
R | 0 | 0.00 | General function prediction only |
S | 1528 | 25.17 | Function unknown |
- | 548 | 9.03 | Not in COGs |