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Table 5 Carbohydrate activated enzyme profile of glycoside hydrolases in H57

From: Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57

Family

Known activity

%a

GH16

Xyloglucan, keratan-sulfate, endo-1,4-β-galactosidase, endo-1,3- β-glucanase, and others

2.5

GH4

Maltose-6-phosphate glucosidase, α-glucosidase, α-galactosidase, and others

7.5

GH5

Chitosanase, β-mannosidase, cellulase, glucan 1,3-β-glucosidase, and others

2.5

GH13

α-amylase, pullulanase, cyclomaltodextrin glucanotransferase and others

10

GH11

Xylanase

2.5

GH23

Lysozyme type G and peptidoglycan lyase

2.5

GH3

β-glucosidase, xylan 1,4-β-xylosidase, β-N-acetylhexosaminidase, and others

2.5

GH126

Other

2.5

GH18

Chitinase, endo-β-N-acetylglucosaminidase, and others

7.5

GH26

β-mannanase and β-1,3-xylanase

2.5

GH53

Endo-β-1,4-galactanase

2.5

GH51

α-L-arabinofuranosidase and endoglucanase

5

GH1

β-glucosidase, β-galactosidase, β-mannosidase, and others

12.5

GH73

Peptidoglycan hydrolase with endo-β-N-acetylglucosaminidase specificity

5

GH30

Glucosylceramidase, β-1,6-glucanase, β-xylosidase

5

GH32

Endo-inulinase, endo-levanase, exo-inulinase, and others

7.5

GH46

Chitosanase

2.5

GH109

α-N-acetylgalactosaminidase

5

GH43

Arabinases and xylosidases

10

GH68

Levansucrase, β-fructofuranosidase and inulosucrase

2.5

 

Total GH hits:

40

 

Total ORFs:

3,828

 

% GH ORFs:

1.04

  1. aPercentage of total GH hits