Table 4 ISO4-H5 genes assigned to COG functional categories
Code | value | % of totala | Description |
|---|---|---|---|
J | 144 | 7.89 | Translation |
A | 1 | 0.05 | RNA processing and modification |
K | 67 | 3.67 | Transcription |
L | 123 | 6.74 | Replication, recombination and repair |
B | 1 | 0.05 | Chromatin structure and dynamics |
D | 9 | 0.49 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 17 | 0.93 | Defense mechanisms |
T | 20 | 1.10 | Signal transduction mechanisms |
M | 27 | 1.48 | Cell wall/membrane biogenesis |
N | 2 | 0.11 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 13 | 0.71 | Intracellular trafficking and secretion |
O | 53 | 2.90 | Posttranslational modification, protein turnover, chaperones |
C | 87 | 4.77 | Energy production and conversion |
G | 40 | 2.19 | Carbohydrate transport and metabolism |
E | 99 | 5.42 | Amino acid transport and metabolism |
F | 46 | 2.52 | Nucleotide transport and metabolism |
H | 105 | 5.75 | Coenzyme transport and metabolism |
I | 18 | 0.99 | Lipid transport and metabolism |
P | 90 | 4.93 | Inorganic ion transport and metabolism |
Q | 14 | 0.77 | Secondary metabolites biosynthesis, transport and catabolism |
R | 242 | 13.26 | General function prediction only |
S | 126 | 6.90 | Function unknown |
- | 481 | 26.35 | Not in COGs |