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Table 3 ISO4-H5 genome nucleotide content and gene count

From: The complete genome sequence of the methanogenic archaeon ISO4-H5 provides insights into the methylotrophic lifestyle of a ruminal representative of the Methanomassiliicoccales

Attribute

Value

% of totala

Genome size (bp)

1,937,882

100.00

DNA coding (bp)

1,747,977

90.20

G + C content (bp)

1,046,533

54.0

DNA scaffolds

1

100.00

Total genes

1,874

100.00

Protein-coding genes

1,817

96.95

RNA genes

54

2.29

Pseudo genes

3

0.16

Genes in internal clusters

NA

 

Genes with function prediction

1113

59.39

Genes assigned to COGs

1,434

76.52

Genes with Pfam domains

396

21.13

Genes with signal peptides

157

8.38

Genes with transmembrane helices

352

18.78

CRISPR repeats

1

 
  1. aTotal is based on either the size of the genome in base pairs, or the total number of protein coding genes in the annotated genome