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Table 5 Number of strain-specific genes with general COG functional categories

From: Whole genome shotgun sequence of Bacillus amyloliquefaciens TF28, a biocontrol entophytic bacterium

Code Value %age Description
J 2 0.99 Translation,ribosomal structure and biogenesis
A 0 0 RNA processing and modification
K 5 2.49 Transcription
L 4 1.99 Replication, recombination and repair
D 5 2.49 Cell cycle control, Cell division, chromosome partitioning
V 9 4.48 Defense mechanisms
T 7 3.48 Signal transduction mechanisms
N 1 0.49 Cell motility
C 3 1.49 Energy production and conversion
G 14 6.97 Carbohydrate transport and metabolism
E 8 3.98 Amino acid transport and metabolism
F 4 1.99 Nucleotide transport and metabolism
H 6 2.99 Coenzyme transport and metabolism
I 1 0.49 Lipid transport and metabolism
P 1 0.49 Inorganic ion transport and metabolism
Q 1 0.49 Secondary metabolites biosynthesis, transport and catabolism
R 9 4.48 General function prediction only
S 3 1.49 Function unknown
- 116 57.71 Not in COGs