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Table 4 Number of genes associated with general COG functional categories

From: Whole genome shotgun sequence of Bacillus amyloliquefaciens TF28, a biocontrol entophytic bacterium

Code Value %age Description
J 136 3.02 Translation, ribosomal structure and biogenesis
A 0 0 RNA processing and modification
K 269 5.97 Transcription
L 114 2.53 Replication, recombination and repair
B 1 0.02 Chromatin structure and dynamics
D 34 0.75 Cell cycle control, Cell division, chromosome partitioning
V 49 1.09 Defense mechanisms
T 134 2.97 Signal transduction mechanisms
M 170 3.77 Cell wall/membrane biogenesis
N 54 1.19 Cell motility
U 45 0.99 Intracellular trafficking and secretion
O 96 2.13 Posttranslational modification, protein turnover, chaperones
C 178 3.95 Energy production and conversion
G 243 5.39 Carbohydrate transport and metabolism
E 342 7.58 Amino acid transport and metabolism
F 78 1.73 Nucleotide transport and metabolism
H 123 2.73 Coenzyme transport and metabolism
I 116 2.57 Lipid transport and metabolism
P 208 4.61 Inorganic ion transport and metabolism
Q 122 2.71 Secondary metabolites biosynthesis, transport and catabolism
R 429 9.51 General function prediction only
S 277 6.14 Function unknown
- 1291 28.63 Not in COGs
  1. The total % age is based on the total number of protein coding genes in the annotated genome