Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | COG category |
|---|---|---|---|
J | 169 | 5.70 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 172 | 5.84 | Transcription |
L | 131 | 4.45 | Replication, recombination and repair |
B | 3 | 0.10 | Chromatin structure and dynamics |
D | 27 | 0.92 | Cell cycle control, cell division, chromosome partitioning |
V | 37 | 1.25 | Defense mechanisms |
T | 119 | 4.04 | Signal transduction mechanisms |
M | 163 | 5.53 | Cell wall/membrane/envelope biogenesis |
N | 39 | 1.32 | Cell motility |
U | 83 | 2.82 | Intracellular trafficking, secretion, and vesicular transport |
O | 106 | 3.59 | Posttranscriptional modification, protein turnover, chaperones |
C | 183 | 6.21 | Energy production and conversion |
G | 111 | 3.76 | Carbohydrate transport and metabolism |
E | 304 | 10.31 | Amino acid transport and metabolism |
F | 71 | 2.41 | Nucleotide transport and metabolism |
H | 111 | 3.76 | Coenzyme transport and metabolism |
I | 110 | 3.73 | Lipid transport and metabolism |
P | 204 | 6.92 | Inorganic ion transport and metabolism |
Q | 72 | 2.44 | Secondary metabolite biosynthesis, transport and catabolism |
R | 313 | 10.62 | General function prediction only |
S | 184 | 6.24 | Function unknown |
- | 233 | 7.91 | Not in COGS |