Skip to main content

Table 3 Genome statistics

From: Draft genome sequence of Lampropedia cohaerens strain CT6T isolated from arsenic rich microbial mats of a Himalayan hot water spring

Attribute Genome (total) Value % of totala
Genome size (bp) 3,158,922 100.00
DNA coding (bp) 2,808,764 88.92
DNA G+C (bp) 2,004,739 63.46
DNA scaffolds 41 100.00
Total genes 2909 100.00
Protein coding genes 2823 97.04
RNA genes 86 2.96
Pseudo genes 0 0.00
Genes in internal clusters 302 10.38
Genes with function prediction 2439 83.84
Genes assigned to COGs 2713 92.09
Genes with Pfam domains 2539 87.28
Genes with signal pedtides 238 8.18
Genes with transmembrane helices 665 22.86
CRISPR repeats 3 100.00
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes predicted in the annotated draft genome