Table 5 Number of genes associated with general COG functional categories
From: Complete genome sequence of thermophilic Bacillus smithii type strain DSM 4216T
Code | Value | % age | Description |
|---|---|---|---|
J | 162 | 4.46 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 179 | 4.92 | Transcription |
L | 160 | 4.40 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 28 | 0.77 | Cell cycle control, Cell division, chromosome partitioning |
V | 31 | 0.85 | Defense mechanisms |
T | 125 | 3.44 | Signal transduction mechanisms |
M | 132 | 3.63 | Cell wall/membrane biogenesis |
N | 64 | 1.76 | Cell motility |
U | 42 | 1.16 | Intracellular trafficking and secretion |
O | 92 | 2.53 | Posttranslational modification, protein turnover, chaperones |
C | 156 | 4.29 | Energy production and conversion |
G | 174 | 4.79 | Carbohydrate transport and metabolism |
E | 291 | 8.01 | Amino acid transport and metabolism |
F | 74 | 2.04 | Nucleotide transport and metabolism |
H | 107 | 2.94 | Coenzyme transport and metabolism |
I | 94 | 2.59 | Lipid transport and metabolism |
P | 154 | 4.24 | Inorganic ion transport and metabolism |
Q | 70 | 1.93 | Secondary metabolites biosynthesis, transport and catabolism |
R | 382 | 10.51 | General function prediction only |
S | 236 | 6.49 | Function unknown |
- | 1,321 | 36.34 | Not in COGs |