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Table 4 Number of protein coding genes of Dehalogenimonas alkenigignens IP3-3T associated with general COG functional categories

From: Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3T)

Code Value %agea Description
J 156 12.06 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 70 5.41 Transcription
L 69 5.33 Replication, recombination and repair
B 2 0.15 Chromatin structure and dynamics
D 10 0.77 Cell cycle control, Cell division, chromosome partitioning
V 17 1.31 Defense mechanisms
T 68 5.26 Signal transduction mechanisms
M 29 2.24 Cell wall/membrane biogenesis
N 11 0.85 Cell motility
U 14 1.08 Intracellular trafficking and secretion
O 77 5.95 Posttranslational modification, protein turnover, chaperones
C 99 7.65 Energy production and conversion
G 46 3.55 Carbohydrate transport and metabolism
E 142 10.97 Amino acid transport and metabolism
F 50 3.86 Nucleotide transport and metabolism
H 91 7.03 Coenzyme transport and metabolism
I 45 3.48 Lipid transport and metabolism
P 82 6.34 Inorganic ion transport and metabolism
Q 14 1.08 Secondary metabolites biosynthesis, transport and catabolism
R 124 9.58 General function prediction only
S 66 5.10 Function unknown
- 824 41.45 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the genome