Table 2 Genome sequencing project information for Dehalogenimonas alkenigignens IP3-3T
From: Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3T)
MIGS ID | Property | Term |
|---|---|---|
MIGS 31 | Finishing quality | Improved high-quality draft |
MIGS-28 | Libraries used | Three libraries: 454 Titanium standard library, 454 paired-end library (8Â kb insert size), and Illumina TruSeq library |
MIGS 29 | Sequencing platforms | 454 Titanium standard, 454 Titanium paired-end, Illumina MiSeq |
MIGS 31.2 | Fold coverage | 42.35× (454 standard), 29.86× (454 paired-end), 583.50× (Illumina) |
MIGS 30 | Assemblers | Roche gsAssembler 2.6, CLCbio CLC Genomics Workbench 6.5.1 |
MIGS 32 | Gene calling method | Prodigal |
| Â | Locus Tag | DEALK |
| Â | Genbank ID | LFDV00000000 |
| Â | GenBank Date of Release | December 15, 2015 |
| Â | GOLD ID | Gp0085286 |
| Â | BIOPROJECT | PRJNA261058 |
MIGS 13 | Source Material Identifier | IP3-3T (=JCM 17062 = NRRL B-59545) |
| Â | Project relevance | Bioremediation, Environmental, Tree of Life |