Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 153 | 9.7 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.1 | RNA processing and modification |
K | 71 | 4.5 | Transcription |
L | 86 | 5.4 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 27 | 1.7 | Cell cycle control, Cell division, chromosome partitioning |
V | 28 | 1.8 | Defense mechanisms |
T | 48 | 3.0 | Signal transduction mechanisms |
M | 117 | 7.4 | Cell wall/membrane biogenesis |
N | 12 | 0.8 | Cell motility |
U | 56 | 3.5 | Intracellular trafficking and secretion |
O | 88 | 5.6 | Posttranslational modification, protein turnover, chaperones |
C | 95 | 6.0 | Energy production and conversion |
G | 59 | 3.7 | Carbohydrate transport and metabolism |
E | 123 | 7.8 | Amino acid transport and metabolism |
F | 49 | 3.1 | Nucleotide transport and metabolism |
H | 109 | 6.9 | Coenzyme transport and metabolism |
I | 40 | 2.5 | Lipid transport and metabolism |
P | 89 | 5.6 | Inorganic ion transport and metabolism |
Q | 26 | 1.6 | Secondary metabolites biosynthesis, transport and catabolism |
R | 170 | 10.8 | General function prediction only |
S | 135 | 8.5 | Function unknown |
- | 275 | 15.9 | Not in COGs |