Table 3 Nucleotide and gene count levels of the genome
From: Draft genome sequence of Fusicladium effusum, cause of pecan scab
Attribute | Genome (total) | |
|---|---|---|
Value | % of totala | |
Genome size (Mbp) | ~40.1 | |
DNA coding (bp) | 23932944(/40096772) | 59.7 |
DNA G + C content (bp) | 19203566(/40096772) | 48 |
DNA scaffolds | 545 | |
Total genesa | 50192 | |
Protein coding genes | 18501(/50192) | 36.9 |
RNA genes | Not reported | |
Pseudo genes | Not reported | |
Genes in internal clusters | Not reported | |
Genes with function prediction | Not reported | |
Genes assigned to COGs | 5263 (/50192) | 10.5 |
Genes with Pfam domains | Not reported | |
Genes with signal peptides | Not reported | |
Genes with transmembrane helices | Not reported | |
CRISPR repeats | Not reported | |