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Table 6 Gliding motility-related genes in strain GH29-5T compared to genes in Flavobacterium strains studied by McBride and Zhu [43]

From: High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T

 

F. suncheonense GH29-5T

F. rivuli DSM 21788T

F. johnsoniae ATCC 17061T

locus tag prefix

G498_RS01

F565_ RS01

Fjoh_

Gliding motility

–

–

+

Adhesin-like

  remA

00716

–

0808

  remB

01803

–

1657

  sprB

+b

–

0979

ATP-binding cassette transporter

  gldA

02505

05270

1516

  gldF

02374

00760

2722

  gldG

02375

00765

2721

Additional proteins

  gldB a

00808

13390

1793

  gldC

00807

13385

1794

  gldD a

01936

18865

1540

  gldE

00405

18860

1539

  gldH a

02655

10515

0890

  gldJ a

00438

11845

1557

Peptidoprolyl isomerase (‘Flavobacteriia’, protein folding)

  gldI

01009

08180

2369

Type IX secretion system (secretion of RemA/RemB)

  gldK a

00758

18605

1853

  gldL a

00757

18600

1854

  gldM a

00756

18595

1855

  gldN a

00755

18590

1856

  sprA a

01807

06065

1653

  sprE a

02154

19150

1051

  sprT a

02545

05475

1466

  1. aessential gliding motility genes after McBride and Zhu [43]
  2. bpartial gene sequences, located at the beginning of AUCZ00000022 and at the end of AUCZ00000002