Table 4 Number of genes associated with general COG functional categories
From: Insights into the single cell draft genome of “Candidatus Achromatium palustre”
Code | Value | % age | Description |
|---|---|---|---|
J | 167 | 5.00 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 51 | 1.52 | Transcription |
L | 67 | 2.00 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 25 | 0.75 | Cell cycle control, Cell division, chromosome partitioning |
V | 81 | 2.42 | Defense mechanisms |
T | 126 | 3.77 | Signal transduction mechanisms |
M | 156 | 4.67 | Cell wall/membrane biogenesis |
N | 53 | 1.59 | Cell motility |
U | 28 | 0.84 | Intracellular trafficking and secretion |
O | 135 | 4.04 | Posttranslational modification, protein turnover, chaperones |
C | 128 | 3.83 | Energy production and conversion |
G | 56 | 1.68 | Carbohydrate transport and metabolism |
E | 131 | 3.92 | Amino acid transport and metabolism |
F | 46 | 1.38 | Nucleotide transport and metabolism |
H | 95 | 2.84 | Coenzyme transport and metabolism |
I | 54 | 1.62 | Lipid transport and metabolism |
P | 82 | 2.45 | Inorganic ion transport and metabolism |
Q | 21 | 0.63 | Secondary metabolites biosynthesis, transport and catabolism |
R | 191 | 5.71 | General function prediction only |
S | 92 | 2.75 | Function unknown |
- | 1722 | 51.51 | Not in COGs |