Skip to main content

Table 6 Highlighted genes of Shimia str. SK013 present in other roseobacters

From: Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment

Highlighted gene products and locus tags DMSP lyase
DddP
Shim_05930
DMSP
Demethylase
Shim_07490
DMSO reductase
Shim_34610
Trimethylamine methyltransferase
Shim_09600, 31260
Type IV pilus biogenesis
Shim_13020
AHL acylase
QuiP precursor
Shim_09300
Homoserine/homoserine lactone efflux protein
Shim_16180
N-AHLs
Shim_31370
Shimia haliotis + + + + + + + +
Shimia marina   + + + + + +  
Oceanicola nanhaiensis +    +    + +
Octadecabacter antarcticus   + + +   +   
Octadecabacter arcticus + + + +   +   
Roseobacter litoralis + + + +   + + +
Phaeobacter arcticus   + + + + + +  
Stappia stellulata     +    +  
Leisingera nanhaiensis + + +   + +   
Labrenzia aggregata         
Loktanella cinnabarina     +   +   +
Sulfitobacter pontiacus     + + +   
Sediminimonas qiaohouensis   +   +   + + +
Wenxinia marina     +   + +  
\