Table 4 Genome statistics
From: Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 5,411,683 | 100.00 |
DNA coding (bp) | 4,737,274 | 87.5 |
DNA G + C (bp) | 3,604,487 | 66.6 |
DNA scaffolds | 2 | 100.00 |
Total genes | 4,778 | 100.00 |
Protein coding genes | 4,683 | 98.0 |
RNA genes | 95 | 1.9 |
Pseudo genes | NA | NA |
Genes in internal clusters | NA | NA |
Genes with function prediction | 3,566 | 74.6 |
Genes assigned to COGs | 3,586 | 76.6 |
Genes with Pfam domains | 3,892 | 83.1 |
Genes with signal peptides | 501 | 10.6 |
Genes with transmembrane helices | 1132 | 24.1 |
CRISPR repeats | 0 | - |