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Table 4 Number of genes associated with general COG functional categories

From: Genome sequence of Shinella sp. strain DD12, isolated from homogenized guts of starved Daphnia magna

Code Value % age Description
J 206 3.07 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 666 9.92 Transcription
L 259 3.86 Replication, recombination and repair
B 7 0.10 Chromatin structure and dynamics
D 52 0.77 Cell cycle control, Cell division, chromosome partitioning
V 65 0.97 Defense mechanisms
T 334 4.97 Signal transduction mechanisms
M 261 3.89 Cell wall/membrane biogenesis
N 88 1.31 Cell motility
U 111 1.65 Intracellular trafficking and secretion
O 177 2.64 Posttranslational modification, protein turnover, chaperones
C 338 5.03 Energy production and conversion
G 605 9.01 Carbohydrate transport and metabolism
E 955 14.22 Amino acid transport and metabolism
F 130 1.94 Nucleotide transport and metabolism
H 226 3.37 Coenzyme transport and metabolism
I 218 3.25 Lipid transport and metabolism
P 407 6.06 Inorganic ion transport and metabolism
Q 194 2.89 Secondary metabolites biosynthesis, transport and catabolism
R 781 11.63 General function prediction only
S 634 9.44 Function unknown
- 1535 20.32 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome