Table 3 Genome statistics
From: Complete genome sequence of Methanospirillum hungatei type strain JF1
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 3,544,738 | 100.00 |
DNA coding (bp) | 3,142,074 | 88.94 |
DNA G + C (bp) | 1,600,415 | 45.15 |
DNA scaffolds | 1 | 100.00 |
Total genes | 3,307 | 100.00 |
Protein coding genes | 3,239 | 97.94 |
RNA genes | 68 | 2.06 |
Pseudo genes | 99 | 2.99 |
Genes in internal clusters | 2172 | 65.68 |
Genes with function prediction | 2,018 | 61.02 |
Genes assigned to COGs | 1872 | 56.61 |
Genes with Pfam domains | 2577 | 77.93 |
Genes with signal peptides | 101 | 3.05 |
Genes with transmembrane helices | 762 | 23.04 |
CRISPR repeats | 6 | Â |