Table 4 Number of protein coding genes of Rhizobium leguminosarum bv. trifolii strain CC275e associated with the general COG functional categories
From: Genome sequence of the clover symbiont Rhizobium leguminosarum bv. trifolii strain CC275e
Code | Value | % of total | COG category |
|---|---|---|---|
J | 189 | 2.69 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 624 | 8.88 | Transcription |
L | 186 | 2.65 | Replication |
B | 2 | 0.03 | Chromatin structure and dynamics |
D | 38 | 0.54 | Cell cycle control |
Y | 0 | 0.00 | Nuclear structure |
V | 64 | 0.91 | Defense mechanisms |
T | 361 | 5.14 | Signal transduction mechanisms |
M | 297 | 4.23 | Cell wall/membrane/ biogenesis |
N | 96 | 1.37 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 74 | 1.05 | Intracellular trafficking |
O | 185 | 2.63 | Posttranslational modification |
C | 295 | 4.20 | Energy production and conversion |
G | 646 | 9.19 | Carbohydrate transport and metabolism |
E | 672 | 9.56 | Amino acid transport and metabolism |
F | 108 | 1.54 | Nucleotide transport and metabolism |
H | 151 | 2.15 | Coenzyme transport and metabolism |
I | 238 | 3.39 | Lipid transport and metabolism |
P | 234 | 3.33 | Inorganic ion transport and metabolism |
Q | 95 | 1.35 | Secondary metabolites biosynthesis |
R | 623 | 8.87 | General function prediction only |
S | 544 | 7.74 | Function unknown |
- | 1305 | 18.57 | Not in COGs |