Table 4 Number of genes associated with the 25 general COG functional categories
Code | Value | Percent | Description |
|---|---|---|---|
J | 204 | 7.95 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.08 | RNA processing and modification |
K | 103 | 4.02 | Transcription |
L | 96 | 3.74 | Replication, recombination and repair |
B | 1 | 0.04 | Chromatin structure and dynamics |
D | 32 | 1.25 | Cell cycle control, Cell division, chromosome partitioning |
V | 116 | 4.52 | Defense mechanisms |
T | 119 | 4.64 | Signal transduction mechanisms |
M | 201 | 7.84 | Cell wall/membrane biogenesis |
N | 34 | 1.33 | Cell motility |
U | 51 | 1.99 | Intracellular trafficking and secretion |
O | 158 | 6.16 | Posttranslational modification, protein turnover, chaperones |
C | 228 | 8.89 | Energy production and conversion |
G | 91 | 3.55 | Carbohydrate transport and metabolism |
E | 162 | 6.32 | Amino acid transport and metabolism |
F | 61 | 2.38 | Nucleotide transport and metabolism |
H | 150 | 5.85 | Coenzyme transport and metabolism |
I | 95 | 3.70 | Lipid transport and metabolism |
P | 178 | 6.94 | Inorganic ion transport and metabolism |
Q | 36 | 1.40 | Secondary metabolites biosynthesis, transport and catabolism |
R | 237 | 9.24 | General function prediction only |
S | 146 | 5.69 | Function unknown |
- | 1,240 | 34.86 | Not in COGs |