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Table 1 Classification and general features of Pantoea sp. 3.5.1. in accordance with the MIGS recommendations [42] as published by the Genome Standards Consortium [43]

From: High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [44]

  

Phylum Proteobacteria

TAS [45]

  

Class Gammaproteobacteria

TAS [45, 46]

  

Order “Enterobacteriales”

TAS [4749]

  

Family Enterobacteriaceae

TAS [49]

  

Genus Pantoea

TAS [10, 50]

  

Species Pantoea sp.

TAS [51, 52]

  

Type strain: 3.5.1

IDA

 

Gram stain

Negative

IDA

 

Cell shape

Rod-shaped

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-spore forming

IDA

 

Temperature range

Mesophilic

IDA

 

Optimum temperature

+37 °C

IDA

 

pH range; Optimum

3.5–7; 5

IDA

 

Carbon source

D-glucose, lactose, maltose, mannite

IDA

 

Energy source

Chemoorganotroph

NAS

MIGS-6

Habitat

Soil

IDA

MIGS-6.3

Salinity

Not tested

 

MIGS-22

Oxygen requirement

Facultative aerobic

IDA

MIGS-15

Biotic relationship

Free living

IDA

MIGS-14

Pathogenicity

Opportunistic pathogen

NAS

MIGS-4

Geographic location

Agerze village, Aznakaevo district, Republic of Tatarstan, Russia

IDA

MIGS-5

Sample collection

September 2010

IDA

MIGS-4.1

Latitude

54°83´

IDA

MIGS-4.2

Longitude

53°00´

IDA

MIGS-4.3

Depth

25 cm

IDA

MIGS-4.4

Altitude

233 m

IDA

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [53]