Table 4 Number of genes associated with the general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 156 | 4.53 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 211 | 6.12 | Transcription |
L | 230 | 6.68 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 59 | 1.71 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 117 | 3.39 | Defense mechanisms |
T | 136 | 3.95 | Signal transduction mechanisms |
M | 169 | 4.90 | Cell wall/membrane/envelope biogenesis |
N | 37 | 1.07 | Cell motility |
Z | 1 | 0.02 | Cytoskeleton |
W | 1 | 0.03 | Extracellular structures |
U | 61 | 1.77 | Intracellular trafficking, secretion, and vesicular transport |
O | 101 | 2.93 | Posttranslational modification, protein turnover, chaperones |
C | 204 | 5.92 | Energy production and conversion |
G | 138 | 4.00 | Carbohydrate transport and metabolism |
E | 339 | 9.84 | Amino acid transport and metabolism |
F | 70 | 2.03 | Nucleotide transport and metabolism |
H | 172 | 4.99 | Coenzyme transport and metabolism |
I | 52 | 1.51 | Lipid transport and metabolism |
P | 206 | 5.98 | Inorganic ion transport and metabolism |
Q | 54 | 1.57 | Secondary metabolites biosynthesis, transport and catabolism |
R | 369 | 10.71 | General function prediction only |
S | 219 | 6.36 | Function unknown |
342 | 9.93 | Not in COGs |