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Table 4 Number of genes associated with the general COG functional categories

From: Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3

Code Value % age Description
J 156 4.53 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 211 6.12 Transcription
L 230 6.68 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 59 1.71 Cell cycle control, cell division, chromosome partitioning
Y 0 0.00 Nuclear structure
V 117 3.39 Defense mechanisms
T 136 3.95 Signal transduction mechanisms
M 169 4.90 Cell wall/membrane/envelope biogenesis
N 37 1.07 Cell motility
Z 1 0.02 Cytoskeleton
W 1 0.03 Extracellular structures
U 61 1.77 Intracellular trafficking, secretion, and vesicular transport
O 101 2.93 Posttranslational modification, protein turnover, chaperones
C 204 5.92 Energy production and conversion
G 138 4.00 Carbohydrate transport and metabolism
E 339 9.84 Amino acid transport and metabolism
F 70 2.03 Nucleotide transport and metabolism
H 172 4.99 Coenzyme transport and metabolism
I 52 1.51 Lipid transport and metabolism
P 206 5.98 Inorganic ion transport and metabolism
Q 54 1.57 Secondary metabolites biosynthesis, transport and catabolism
R 369 10.71 General function prediction only
S 219 6.36 Function unknown
  342 9.93 Not in COGs