Table 4 Number of genes associated with general COG functional categories
From: Complete genome sequence of bacteriophage P8625, the first lytic phage that infects Verrucomicrobia
Code | Value | % of Totala | Description |
|---|---|---|---|
J | 0 | 0.00 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 0 | 0.00 | Transcription |
L | 2 | 3.85 | Replication, recombination and repair |
B | 0 | 0.00 | Chromatin structure and dynamics |
D | 0 | 0.00 | Cell cycle control, cell division, and chromosome partitioning |
V | 0 | 0.00 | Defense mechanisms |
T | 0 | 0.00 | Signal transduction mechanisms |
M | 0 | 0.00 | Cell wall/membrane biogenesis |
N | 0 | 0.00 | Cell motility |
U | 0 | 0.00 | Intracellular trafficking and secretion |
O | 1 | 1.92 | Posttranslational modification, protein turnover, and chaperones |
C | 0 | 0.00 | Energy production and conversion |
G | 0 | 0.00 | Carbohydrate transport and metabolism |
E | 1 | 1.92 | Amino acid transport and metabolism |
F | 0 | 0.00 | Nucleotide transport and metabolism |
H | 0 | 0.00 | Coenzyme transport and metabolism |
I | 0 | 0.00 | Lipid transport and metabolism |
P | 0 | 0.00 | Inorganic ion transport and metabolism |
Q | 0 | 0.00 | Secondary metabolites biosynthesis, transport and catabolism |
R | 0 | 0.00 | General function prediction only |
S | 0 | 0.00 | Function unknown |
X | 2 | 3.85 | Phage terminase and bacteriophage capsid protein |
- | 44 | 84.62 | Not in COGs |