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Table 3 Genome statistics

From: High-quality draft genome sequence of Gracilimonas tropica CL-CB462T (DSM 19535T), isolated from a Synechococcus culture

Attribute Number % of Totala
Genome size (bp) 3,831,242 100.00
DNA coding (bp) 3,482,093 90.89
DNA G + C (bp) 1,645,319 42.94
DNA scaffolds 48 100.00
Total genes 3426 100.00
Protein-coding genes 3373 98.45
RNA genes 53 1.55
Pseudo genes 0  
Genes in internal clusters 1042 30.41
Genes with function prediction 2413 70.43
Genes assigned to COGs 1931 56.36
Genes with Pfam domains 2557 74.64
Genes with signal peptides 385 11.24
Genes with transmembrane helices 912 26.62
CRISPR repeats 0  
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome