Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 2,765,337 | 100.00 |
DNA coding (bp) | 2,496,809 | 90.29 |
DNA G + C (bp) | 1,829,984 | 66.18 |
DNA scaffolds | 61 | 100.00 |
Total genes | 2677 | 100.00 |
Protein coding genes | 2616 | 97.72 |
RNA genes | 61 | 2.28 |
Pseudo genes | Not determined | Not determined |
Genes in internal clusters | Not determined | Not determined |
Genes with function prediction | 2230 | 83.30 |
Genes assigned to COGs | 1885 | 70.41 |
Genes with Pfam domains | 1799 | 78.94 |
Genes with signal peptides | 217 | 8.11 |
Genes with transmembrane helices | 655 | 24.47 |
CRISPR repeats | 1 | 100.00 |