Table 4 Number of genes associated with general COG functional categories, based on the IMG Annotation Pipeline
Code | Value | % age | Description |
|---|---|---|---|
J | 207 | 7.53 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.04 | RNA processing and modification |
K | 179 | 6.51 | Transcription |
L | 115 | 4.18 | Replication, recombination and repair |
B | 2 | 0.07 | Chromatin structure and dynamics |
D | 32 | 1.16 | Cell cycle control, Cell division, chromosome partitioning |
V | 63 | 2.29 | Defense mechanisms |
T | 132 | 4.80 | Signal transduction mechanisms |
M | 171 | 6.22 | Cell wall/membrane biogenesis |
N | 71 | 2.58 | Cell motility |
U | 36 | 1.31 | Intracellular trafficking and secretion |
O | 128 | 4.65 | Posttranslational modification, protein turnover, chaperones |
C | 195 | 7.09 | Energy production and conversion |
G | 149 | 5.42 | Carbohydrate transport and metabolism |
E | 253 | 9.20 | Amino acid transport and metabolism |
F | 72 | 2.62 | Nucleotide transport and metabolism |
H | 155 | 5.64 | Coenzyme transport and metabolism |
I | 136 | 4.95 | Lipid transport and metabolism |
P | 176 | 6.40 | Inorganic ion transport and metabolism |
Q | 64 | 2.33 | Secondary metabolites biosynthesis, transport and catabolism |
R | 202 | 7.35 | General function prediction only |
S | 147 | 5.35 | Function unknown |
- | 1057 | 29.98 | Not in COGs |