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Table 4 Number of genes associated with general COG functional categories, based on the IMG Annotation Pipeline

From: Draft genome sequence of Halomonas meridiana R1t3 isolated from the surface microbiota of the Caribbean Elkhorn coral Acropora palmata

Code Value % age Description
J 207 7.53 Translation, ribosomal structure and biogenesis
A 1 0.04 RNA processing and modification
K 179 6.51 Transcription
L 115 4.18 Replication, recombination and repair
B 2 0.07 Chromatin structure and dynamics
D 32 1.16 Cell cycle control, Cell division, chromosome partitioning
V 63 2.29 Defense mechanisms
T 132 4.80 Signal transduction mechanisms
M 171 6.22 Cell wall/membrane biogenesis
N 71 2.58 Cell motility
U 36 1.31 Intracellular trafficking and secretion
O 128 4.65 Posttranslational modification, protein turnover, chaperones
C 195 7.09 Energy production and conversion
G 149 5.42 Carbohydrate transport and metabolism
E 253 9.20 Amino acid transport and metabolism
F 72 2.62 Nucleotide transport and metabolism
H 155 5.64 Coenzyme transport and metabolism
I 136 4.95 Lipid transport and metabolism
P 176 6.40 Inorganic ion transport and metabolism
Q 64 2.33 Secondary metabolites biosynthesis, transport and catabolism
R 202 7.35 General function prediction only
S 147 5.35 Function unknown
- 1057 29.98 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome