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Table 11 Putative roles of the most abundant bacterial and eukaryotic OTUs

From: Metagenomic analysis of planktonic microbial consortia from a non-tidal urban-impacted segment of James River

 

JREM1 Riffles_WGS

JREM1 Riffles_16S

Putative Role

% OTUs

reads

% OTUs

reads

Bacteria

 Common free-living

52

1072474

68

2832637

 Pollution degraders

22

484716

10

90537

 Sludge, industrial, and medical waste

12

133200

9

184336

 Pathogens (human, crops, and fish)

14

297920

12

132914

Eukaryote

 Common free-living

52

3468

–

–

 Terrestrial/agriculture/aquaculture

33

1123

–

–

 Pathogens (human, crops, and fish)

14

261

–

–

  1. – not examined