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Table 1 Classification and general features of Mesorhizobium loti strain CJ3Sym in accordance with the MIGS recommendations [30] published by the Genome Standards Consortium [31]

From: High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [32]

  

Phylum Proteobacteria

TAS [23, 33]

  

Class Alphaproteobacteria

TAS [34]

  

Order Rhizobiales

TAS [35]

  

Family Phyllobacteriaceae

TAS [36]

  

Genus Mesorhizobium

TAS [9]

  

Species Mesorhizobium loti

TAS [8]

  

Strain CJ3Sym

TAS [2]

 

Gram stain

Negative

IDA

 

Cell shape

Rod

IDA

 

Motility

Motile

IDA

 

Sporulation

non-sporulating

NAS

 

Temperature range

Mesophile

NAS

 

Optimum temperature

28 °C

NAS

 

pH range; Optimum

Unknown

NAS

 

Carbon source

various

TAS [9]

 

Energy source

chemoorganotroph

TAS [9]

MIGS-6

Habitat

Soil, root nodule, host

TAS [8]

MIGS-6.3

Salinity

Unknown

NAS

MIGS-22

Oxygen requirement

Aerobic

TAS [8]

MIGS-15

Biotic relationship

Free living, Symbiotic

TAS [8]

MIGS-14

Pathogenicity

None

NAS

 

Biosafety level

1

TAS [37]

 

Isolation

Isolated following transfer of ICEMlSymR7A from the donor M. loti strain R7A to a nonsymbiotic recipient Mesorhizobium strain CJ3 in a laboratory mating

TAS [2]

MIGS-4

Geographic location

Dunedin, Otago, NZ

TAS [2]

MIGS-5

Isolation date

1998

TAS

MIGS-4.1

Latitude

-45.864179

TAS [2]

MIGS-4.2

Longitude

170.512551

TAS [2]

MIGS-4.3

Depth

5-10 cm

IDA

MIGS-4.4

Altitude

50 m

IDA

  1. aEvidence codes – IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [38, 39]