Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 8,319,549 | 100.0 |
DNA coding (bp) | 7,149,098 | 85.9 |
DNA G + C (bp) | 5,915,420 | 71.0 |
DNA scaffolds | 20 | 100.0 |
Total genes | 7,344 | 100.0 |
Protein-coding genes | 7,240 | 98.6 |
RNA genes | 75 | 1.0 |
Pseudo genes | 29 | 0.4 |
Genes in internal clusters | 761 | 10.4 |
Genes with functional prediction | 3,207 | 43.7 |
Genes assigned to COGs | 4,450 | 60.6 |
Genes with Pfam domains | 4,543 | 61.9 |
Genes with signal peptides | 653 | 8.9 |
Genes with transmembrane helices | 1,770 | 24.1 |
CRISPR repeats | 5 | - |