Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 176 | 4.17 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 443 | 10.50 | Transcription |
L | 173 | 4.10 | Replication, recombination and repair |
B | 1 | 0.02 | Chromatin structure and dynamics |
D | 31 | 0.76 | Cell cycle control, Cell division, chromosome partitioning |
V | 53 | 1.26 | Defense mechanisms |
T | 213 | 5.05 | Signal transduction mechanisms |
M | 179 | 4.24 | Cell wall/membrane biogenesis |
N | 6 | 0.14 | Cell motility |
U | 43 | 1.02 | Intracellular trafficking and secretion |
O | 133 | 3.15 | Posttranslational modification, protein turnover, chaperones |
C | 275 | 6.52 | Energy production and conversion |
G | 288 | 6.83 | Carbohydrate transport and metabolism |
E | 380 | 9.01 | Amino acid transport and metabolism |
F | 97 | 2.3 | Nucleotide transport and metabolism |
H | 184 | 4.36 | Coenzyme transport and metabolism |
I | 233 | 5.52 | Lipid transport and metabolism |
P | 244 | 5.78 | Inorganic ion transport and metabolism |
Q | 166 | 3.93 | Secondary metabolites biosynthesis, transport and catabolism |
R | 566 | 13.42 | General function prediction only |
S | 333 | 7.89 | Function unknown |
- | 1262 | 24.91 | Not in COGs |