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Table 1 Classification and general features of Rhodococcus sp. JG-3 [13]

From: Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [14]

  

Phylum Actinobacteria

TAS [15]

  

Class Actinobacteria

TAS [15]

  

Order Actinomycetales

TAS [14]

  

Family Nocardiaceae

TAS [16]

  

Genus Rhodococcus

TAS [14]

  

Species Rhodococcus

 
  

Strain JG-3

 
 

Gram stain

positive

IDA

 

Cell shape

Rod

IDA

 

Motility

Not reported

IDA

 

Sporulation

Not reported

NAS

 

Temperature range

<−5 °C to 30 °C

NAS

 

Optimum temperature

~20 °C

IDA

 

pH range; Optimum

no data; 7

IDA

 

Carbon source

R2A, TSA complex media

IDA

MIGS-6

Habitat

Terrestrial, permafrost soil

IDA

MIGS-6.3

Salinity

0-7 % NaCl

IDA

MIGS-22

Oxygen requirement

aerobic

IDA

MIGS-15

Biotic relationship

free-living

IDA

MIGS-14

Pathogenicity

Non-pathogen

NAS

MIGS-4

Geographic location

University Valley, Dry Valleys, Antarctica

IDA

MIGS-5

Sample collection

December, 2009

IDA

MIGS-4.1

Latitude

77d 51.817 s S

IDA

MIGS-4.2

Longitude

160d43.524 s E

IDA

MIGS-4.4

Altitude

37-42 cm below soil surface, in ice-cemented permafrost

IDA

  1. aEvidence codes - IDA: Inferred from Direct Assay, TAS: traceable author statement (i.e., a direct report exists in the literature), NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are derived from the Gene Ontology project [17]