Table 3 Genome statistics Acidiphilium sp. JA12-A1
From: Permanent draft genome sequence of Acidiphilium sp. JA12-A1
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,184,331 | 100.0 |
DNA coding (bp) | 3,699,946 | 88.4 |
DNA G + C (bp) | 2,801,106 | 66.9 |
DNA scaffolds | 298 | |
Total genes | 4,065 | 100.0 |
Protein coding genes | 4,015 | 98.8 |
RNA genes | 50 | 1.2 |
Pseudo genes | 293 | 7.2 |
Genes in internal clusters | 3,092 | 76.1 |
Genes with function prediction | 3,193 | 78.6 |
Genes assigned to COGs | 2,663 | 65.5 |
Genes with Pfam domains | 3,191 | 78.5 |
Genes with signal peptides | 268 | 6.6 |
Genes with transmembrane helices | 857 | 21.1 |
CRISPR repeats | Not reported |