Table 3 Genome statistics
From: The complete genome sequence of the rumen methanogen Methanosarcina barkeri CM1
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,501,171 | 100.00 |
DNA coding (bp) | 3,149,919 | 69.98 |
DNA G + C (bp) | 1,763,740 | 39.18 |
DNA scaffolds | 1 | Â |
Total genes | 3,655 | 100.00 |
Protein coding genes | 3,523 | 96.39 |
RNA genes | 69 | 1.89 |
Pseudo genes | 63 | 1.72 |
Genes with function prediction | 2,410 | 65.94 |
Genes assigned to COGs | 2,267 | 64.35 |
Genes with Pfam domains | 2,953 | 80.79 |
Genes with signal peptides | 358 | 10.16 |
Genes with transmembrane helices | 881 | 25.01 |
CRISPR repeats | 3 | Â |