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Table 3 Nucleotide content and gene count levels of the genome

From: The complete genome sequence and emendation of the hyperthermophilic, obligate iron-reducing archaeon “Geoglobus ahangari” strain 234T

Attribute

Value

% of totala

Size (bp)

1,770,093

100.0 %

Coding region (bp)

1,662,832

93.9 %

G + C content (bp)

940,071

53.1 %

Number of replicons

1

 

Extrachromosomal elements

0

 

Total genes

2072

100.0 %

RNA genes

52

2.5 %

rRNA operons

2

 

Protein-coding genes

2034

100.0 %

Pseudogenes

47

2.3 %

Genes with function prediction

1677

82.4 %

Genes in paralog clusters

1406

69.1 %

Genes assigned to COGs

1470

72.2 %

Genes assigned Pfam domains

1667

82.0 %

Genes with signal peptides

55

2.7 %

Genes with transmembrane helices

409

20.1 %

CRISPR repeats

7

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome