Attribute | Number | % of Total |
---|---|---|
DNA, total number of bases | 4489248 | 100.0 |
DNA coding number of bases | 3981399 | 88.7 |
DNA G + C number of bases | 1777758 | 39.6 |
DNA scaffolds | 23 | 100.0 |
Genes total number | 4056 | 100.0 |
Protein coding genes | 3991 | 98.4 |
RNA genes | 65 | 1.6 |
rRNA genes | 8 | 0.2 |
5S rRNA | 5 | 0.1 |
16S rRNA | 1 | <0.1 |
23S rRNA | 2 | 0.1 |
tRNA genes | 48 | 1.2 |
Other RNA genes | 9 | 0.2 |
Protein coding genes with function prediction | 2842 | 70.1 |
without function prediction | 1149 | 28.3 |
Protein coding genes with COGs | 2570 | 63.4 |
Protein coding genes with Pfam | 2924 | 72.1 |
Protein coding genes coding signal peptides | 654 | 16.1 |
Protein coding genes coding transmembrane proteins | 906 | 22.3 |
CRISPR repeats | 0 | Â |