Table 4 Number of genes associated with the 25 general COG functional categories
From: Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9T
Code | Value | % of totala | Description |
|---|---|---|---|
J | 154 | 5.54 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 137 | 4.93 | Transcription |
L | 93 | 3.34 | Replication, recombination and repair |
B | 1 | 0.04 | Chromatin structure and dynamics |
D | 25 | 0.89 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 36 | 1.29 | Defense mechanisms |
T | 83 | 2.98 | Signal transduction mechanisms |
M | 124 | 4.46 | Cell wall/membrane biogenesis |
N | 29 | 1.04 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 53 | 1.91 | Intracellular trafficking and secretion |
O | 92 | 3.31 | Posttranslational modification, protein turnover, chaperones |
C | 155 | 5.57 | Energy production and conversion |
G | 97 | 3.49 | Carbohydrate transport and metabolism |
E | 385 | 13.84 | Amino acid transport and metabolism |
F | 78 | 2.80 | Nucleotide transport and metabolism |
H | 116 | 4.17 | Coenzyme transport and metabolism |
I | 84 | 3.02 | Lipid transport and metabolism |
P | 162 | 5.83 | Inorganic ion transport and metabolism |
Q | 51 | 1.83 | Secondary metabolites biosynthesis, transport and catabolism |
R | 263 | 9.46 | General function prediction only |
S | 186 | 6.69 | Function unknown |
- | 585 | 21.01 | Not in COGs |