Table 4 Number of genes associated with the 25 general COG functional categories
From: Non contiguous-finished genome sequence and description of Bacillus jeddahensis sp. nov.
Code | Value | % of totala | Description |
|---|---|---|---|
J | 179 | 3.86 | Translation |
A | 0 | 0 | RNA processing and modification |
K | 342 | 7.38 | Transcription |
L | 195 | 4.21 | Replication, recombination and repair |
B | 1 | 0.02 | Chromatin structure and dynamics |
D | 39 | 0.84 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0 | Nuclear structure |
V | 81 | 1.75 | Defense mechanisms |
T | 255 | 5.5 | Signal transduction mechanisms |
M | 192 | 4.14 | Cell wall/membrane biogenesis |
N | 57 | 1.23 | Cell motility |
Z | 0 | 0 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 48 | 1.04 | Intracellular trafficking and secretion |
O | 119 | 2.57 | Posttranslational modification, protein turnover, chaperones |
C | 224 | 4.83 | Energy production and conversion |
G | 300 | 6.48 | Carbohydrate transport and metabolism |
E | 425 | 9.17 | Amino acid transport and metabolism |
F | 89 | 1.92 | Nucleotide transport and metabolism |
H | 131 | 2.83 | Coenzyme transport and metabolism |
I | 139 | 3 | Lipid transport and metabolism |
P | 261 | 5.63 | Inorganic ion transport and metabolism |
Q | 82 | 1.77 | Secondary metabolites biosynthesis, transport and catabolism |
R | 500 | 10.79 | General function prediction only |
S | 348 | 7.51 | Function unknown |
- | 1223 | 26.4 | Not in COGs |