Table 4 Genome statistics
From: Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 5,718,434 | 100 |
DNA coding (bp) | 4,930,539 | 86.22 |
DNA G + C (bp) | 3,265,303 | 57.10 |
DNA scaffolds | 3 | 100 |
Total genes | 5,316 | 100 |
Protein-coding genes | 5,172 | 97.29 |
RNA genes | 112 | 2.12 |
Pseudo genes | 25 | 0.47 |
Genes with function prediction | 4,623 | 87.00 |
Genes assigned to COGs | 4,398 | 82.73 |
Genes with Pfam domains | 4,631 | 87.11 |
Genes with signal peptides | 526 | 9.89 |
Genes with transmembrane helices | 1,289 | 24.25 |
CRISPR repeats | 2 | 0.04 |