Table 4 Number of protein coding genes of Mesorhizobium loti NZP2037 associated with the general COG functional categories
From: Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain NZP2037
Code | Value | % age | COG category |
|---|---|---|---|
J | 205 | 3.14 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 603 | 9.24 | Transcription |
L | 242 | 3.71 | Replication, recombination and repair |
B | 7 | 0.11 | Chromatin structure and dynamics |
D | 34 | 0.52 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 82 | 1.26 | Defense mechanisms |
T | 262 | 4.01 | Signal transduction mechanisms |
M | 320 | 4.90 | Cell wall/membrane biogenesis |
N | 51 | 0.78 | Cell motility |
Z | 2 | 0.03 | Cytoskeleton |
W | 1 | 0.02 | Extracellular structures |
U | 142 | 2.17 | Intracellular trafficking and secretion |
O | 197 | 3.02 | Posttranslational modification, protein turnover, chaperones |
C | 381 | 5.84 | Energy production conversion |
G | 624 | 9.56 | Carbohydrate transport and metabolism |
E | 798 | 12.22 | Amino acid transport metabolism |
F | 95 | 1.46 | Nucleotide transport and metabolism |
H | 242 | 3.71 | Coenzyme transport and metabolism |
I | 275 | 4.21 | Lipid transport and metabolism |
P | 267 | 4.09 | Inorganic ion transport and metabolism |
Q | 213 | 3.26 | Secondary metabolite biosynthesis, transport and catabolism |
R | 811 | 12.42 | General function prediction only |
S | 675 | 10.34 | Function unknown |
- | 1,506 | 20.38 | Not in COGS |