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  1. Thermaerobacter marianensis Takai et al. 1999 is the type species of the genus Thermaerobacter, which belongs to the Clostridiales family Incertae Sedis XVII. The species is of special interest because T. mariane...

    Authors: Cliff Han, Wei Gu, Xiaojing Zhang, Alla Lapidus, Matt Nolan, Alex Copeland, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Roxane Tapia, Lynne Goodwin, Sam Pitluck, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis…

    Citation: Standards in Genomic Sciences 2010 3:3030337

    Content type: OriginalPaper

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  2. Nocardiopsis dassonvillei (Brocq-Rousseau 1904) Meyer 1976 is the type species of the genus Nocardiopsis, which in turn is the type genus of the family Nocardiopsaceae. This species is of interest because of its ...

    Authors: Hui Sun, Alla Lapidus, Matt Nolan, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Roxane Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati…

    Citation: Standards in Genomic Sciences 2010 3:3030325

    Content type: OriginalPaper

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  3. Methanothermus fervidus Stetter 1982 is the type strain of the genus Methanothermus. This hyperthermophilic genus is of a thought to be endemic in Icelandic hot springs. M. fervidus was not only the first charact...

    Authors: Iain Anderson, Olivier Duplex Ngatchou Djao, Monica Misra, Olga Chertkov, Matt Nolan, Susan Lucas, Alla Lapidus, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova…

    Citation: Standards in Genomic Sciences 2010 3:3030315

    Content type: OriginalPaper

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  4. Intrasporangium calvum Kalakoutskii et al. 1967 is the type species of the genus Intrasporangium, which belongs to the actinobacterial family Intrasporangiaceae. The species is a Gram-positive bacterium that form...

    Authors: Tijana Glavina Del Rio, Olga Chertkov, Montri Yasawong, Susan Lucas, Shweta Deshpande, Jan-Fang Cheng, Chris Detter, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Amrita Pati, Amy Chen…

    Citation: Standards in Genomic Sciences 2010 3:3030294

    Content type: OriginalPaper

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  5. Desulfarculus baarsii (Widdel 1981) Kuever et al. 2006 is the type and only species of the genus Desulfarculus, which represents the family Desulfarculaceae and the order Desulfarculales. This species is a mesoph...

    Authors: Hui Sun, Stefan Spring, Alla Lapidus, Karen Davenport, Tijana Glavina Del Rio, Hope Tice, Matt Nolan, Alex Copeland, Jan-Fang Cheng, Susan Lucas, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Ionna Pagani, Konstantinos Mavromatis…

    Citation: Standards in Genomic Sciences 2010 3:3030276

    Content type: OriginalPaper

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  6. This report summarizes the proceedings of the one day BioSharing meeting held at the Intelligent Systems for Molecular Biology (ISMB) 2010 conference in Boston, MA, USA This inaugural BioSharing event was host...

    Authors: Dawn Field, Susanna Sansone, Edward F. DeLong, Peter Sterk, Iddo Friedberg, Pascale Gaudet, Susanna Lewis, Renzo Kottmann, Lynette Hirschman, George Garrity, Guy Cochrane, John Wooley, Folker Meyer, Sarah Hunter, Owen White, Brian Bramlett…

    Citation: Standards in Genomic Sciences 2010 3:3030254

    Content type: Report

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  7. This report summarizes the proceedings of the Metagenomics, Metadata, Metaanalysis, Models and Metainfrastructure (M5) Roundtable at the 13th International Society for Microbial Ecology Meeting in Seattle, WA, US...

    Authors: Jack A. Gilbert, Folker Meyer, Rob Knight, Dawn Field, Nikos Kyrpides, Pelin Yilmaz and John Wooley

    Citation: Standards in Genomic Sciences 2010 3:3030235

    Content type: Report

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  8. This report summarizes the proceedings of the first day of the Metagenomics, Metadata and MetaAnalysis (M3) workshop held at the Intelligent Systems for Molecular Biology 2010 conference. The second day, which wa...

    Authors: Dawn Field, Susanna Sansone, Edward F. DeLong, Peter Sterk, Iddo Friedberg, Renzo Kottmann, Lynette Hirschman, George Garrity, Guy Cochrane, John Wooley, Folker Meyer, Sarah Hunter and Owen White

    Citation: Standards in Genomic Sciences 2010 3:3030232

    Content type: Report

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  9. This report summarizes the proceedings of the 9th workshop of the Genomic Standards Consortium (GSC), held at the J. Craig Venter Institute, Rockville, MD, USA. It was the first GSC workshop to have open regis...

    Authors: Tanja Davidsen, Ramana Madupu, Peter Sterk, Dawn Field, George Garrity, Jack Gilbert, Frank Oliver Glöckner, Lynette Hirschman, Eugene Kolker, Renzo Kottmann, Nikos Kyrpides, Folker Meyer, Norman Morrison, Lynn Schriml, Tatiana Tatusova and John Wooley

    Citation: Standards in Genomic Sciences 2010 3:3030216

    Content type: Report

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  10. Methanoplanus petrolearius Ollivier et al. 1998 is the type strain of the genus Methanoplanus. The strain was originally isolated from an offshore oil field from the Gulf of Guinea. Members of the genus Methanopl...

    Authors: Evelyne Brambilla, Olivier Duplex Ngatchou Djao, Hajnalka Daligault, Alla Lapidus, Susan Lucas, Nancy Hammon, Matt Nolan, Hope Tice, Jan-Fang Cheng, Cliff Han, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis…

    Citation: Standards in Genomic Sciences 2010 3:3020203

    Content type: OriginalPaper

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  11. Sulfurimonas autotrophica Inagaki et al. 2003 is the type species of the genus Sulfurimonas. This genus is of interest because of its significant contribution to the global sulfur cycle as it oxidizes sulfur comp...

    Authors: Johannes Sikorski, Christine Munk, Alla Lapidus, Olivier Duplex Ngatchou Djao, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Cliff Han, Jan-Fang Cheng, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis…

    Citation: Standards in Genomic Sciences 2010 3:3020194

    Content type: OriginalPaper

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  12. Both metagenomic data and metatranscriptomic data were collected from surface water (0–2m) of the L4 sampling station (50.2518 N, 4.2089 W), which is part of the Western Channel Observatory long-term coastal-m...

    Authors: Jack A. Gilbert, Folker Meyer, Lynn Schriml, Ian R. Joint, Martin Mühling and Dawn Field

    Citation: Standards in Genomic Sciences 2010 3:3020183

    Content type: OriginalPaper

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  13. Ferrimonas balearica Rossello-Mora et al. 1996 is the type species of the genus Ferrimonas, which belongs to the family Ferrimonadaceae within the Gammaproteobacteria. The species is a Gram-negative, motile, facu...

    Authors: Matt Nolan, Johannes Sikorski, Karen Davenport, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan…

    Citation: Standards in Genomic Sciences 2010 3:3020174

    Content type: OriginalPaper

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  14. The hydrothermal vent clam Calyptogena magnifica (Bivalvia: Mollusca) is a member of the Vesicomyidae. Species within this family form symbioses with chemosynthetic Gammaproteobacteria. They exist in environments...

    Authors: Guus Roeselers, Irene L. G. Newton, Tanja Woyke, Thomas A. Auchtung, Geoffrey F. Dilly, Rachel J. Dutton, Meredith C. Fisher, Kristina M. Fontanez, Evan Lau, Frank J. Stewart, Paul M. Richardson, Kerrie W. Barry, Elizabeth Saunders, John C. Detter, Dongying Wu, Jonathan A. Eisen…

    Citation: Standards in Genomic Sciences 2010 3:3020163

    Content type: OriginalPaper

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  15. Thermobaculum terrenum’ Botero et al. 2004 is the sole species within the proposed genus ‘Thermobaculum’. Strain YNP1T is the only cultivated member of an acid tolerant, extremely thermophilic species belonging ...

    Authors: Hajnalka Kiss, David Cleland, Alla Lapidus, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen…

    Citation: Standards in Genomic Sciences 2010 3:3020153

    Content type: OriginalPaper

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  16. Spirochaeta smaragdinae Magot et al. 1998 belongs to the family Spirochaetaceae. The species is Gram-negative, motile, obligately halophilic and strictly anaerobic and is of interest because it is able to ferment...

    Authors: Konstantinos Mavromatis, Montri Yasawong, Olga Chertkov, Alla Lapidus, Susan Lucas, Matt Nolan, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Roxanne Tapia, Cliff Han, David Bruce, Lynne Goodwin…

    Citation: Standards in Genomic Sciences 2010 3:3020136

    Content type: OriginalPaper

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  17. Arcanobacterium haemolyticum (ex MacLean et al. 1946) Collins et al. 1983 is the type species of the genus Arcanobacterium, which belongs to the family Actinomycetaceae. The strain is of interest because it is an...

    Authors: Montri Yasawong, Hazuki Teshima, Alla Lapidus, Matt Nolan, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, David Bruce, Chris Detter, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova…

    Citation: Standards in Genomic Sciences 2010 3:3020126

    Content type: OriginalPaper

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  18. Vulcanisaeta distributa Itoh et al. 2002 belongs to the family Thermoproteaceae in the phylum Crenarchaeota. The genus Vulcanisaeta is characterized by a global distribution in hot and acidic springs. This is the...

    Authors: Konstantinos Mavromatis, Johannes Sikorski, Elke Pabst, Hazuki Teshima, Alla Lapidus, Susan Lucas, Matt Nolan, Tijana Glavina Del Rio, Jan-Fang Cheng, David Bruce, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Natalia Mikhailova, Amrita Pati…

    Citation: Standards in Genomic Sciences 2010 3:3020117

    Content type: OriginalPaper

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  19. Thermosediminibacter oceani (Lee et al. 2006) is the type species of the genus Thermosediminibacter in the family Thermoanaerobacteraceae. The anaerobic, barophilic, chemoorganotrophic thermophile is characterize...

    Authors: Sam Pitluck, Montri Yasawong, Christine Munk, Matt Nolan, Alla Lapidus, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, David Bruce, Chris Detter, Roxanne Tapia, Cliff Han, Lynne Goodwin, Konstantinos Liolios, Natalia Ivanova…

    Citation: Standards in Genomic Sciences 2010 3:3020108

    Content type: OriginalPaper

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  20. Marinobacter adhaerens HP15 is the type strain of a newly identified marine species, which is phylogenetically related to M. flavimaris, M. algicola, and M. aquaeolei. It is of special interest for research on ma...

    Authors: Astrid Gärdes, Eva Kaeppel, Aamir Shehzad, Shalin Seebah, Hanno Teeling, Pablo Yarza, Frank Oliver Glöckner, Hans-Peter Grossart and Matthias S. Ullrich

    Citation: Standards in Genomic Sciences 2010 3:3020097

    Content type: OriginalPaper

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  21. This report summarizes the proceedings of the 8th meeting of the Genomic Standards Consortium held at the Department of Energy Joint Genome Institute in Walnut Creek, CA, USA on September 9–11, 2009. This thre...

    Authors: Nikos Kyrpides, Dawn Field, Peter Sterk, Renzo Kottmann, Frank Oliver Glöckner, Lynette Hirschman, George M. Garrity, Guy Cochrane and John Wooley

    Citation: Standards in Genomic Sciences 2010 3:3010093

    Content type: Report

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  22. Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thi...

    Authors: Kurt LaButti, Shanmugam Mayilraj, Alicia Clum, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan-Fang Cheng, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Lynne Goodwin, Amy Chen…

    Citation: Standards in Genomic Sciences 2010 3:3010085

    Content type: OriginalPaper

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  23. Olsenella uli (Olsen et al. 1991) Dewhirst et al. 2001 is the type species of the genus Olsenella, which belongs to the actinobacterial family Coriobacteriaceae. The species is of interest because it is frequentl...

    Authors: Markus Göker, Brittany Held, Susan Lucas, Matt Nolan, Montri Yasawong, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, David Bruce, John C. Detter, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova…

    Citation: Standards in Genomic Sciences 2010 3:3010076

    Content type: OriginalPaper

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  24. Ignisphaera aggregans Niederberger et al. 2006 is the type and sole species of genus Ignisphaera. This archaeal species is characterized by a coccoid-shape and is strictly anaerobic, moderately acidophilic, heter...

    Authors: Markus Göker, Brittany Held, Alla Lapidus, Matt Nolan, Stefan Spring, Montri Yasawong, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Lynne Goodwin, Roxanne Tapia, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis…

    Citation: Standards in Genomic Sciences 2010 3:3010066

    Content type: OriginalPaper

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  25. Acetohalobium arabaticum Zhilina and Zavarzin 1990 is of special interest because of its physiology and its participation in the anaerobic C1-trophic chain in hypersaline environments. This is the first completed...

    Authors: Johannes Sikorski, Alla Lapidus, Olga Chertkov, Susan Lucas, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan-Fang Cheng, Cliff Han, Evelyne Brambilla, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova…

    Citation: Standards in Genomic Sciences 2010 3:3010057

    Content type: OriginalPaper

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  26. Planctomyces limnophilus Hirsch and Müller 1986 belongs to the order Planctomycetales, which differs from other bacterial taxa by several distinctive features such as internal cell compartmentalization, multiplic...

    Authors: Kurt LaButti, Johannes Sikorski, Susanne Schneider, Matt Nolan, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Amy Chen…

    Citation: Standards in Genomic Sciences 2010 3:3010047

    Content type: OriginalPaper

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  27. Meiothermus silvanus (Tenreiro et al. 1995) Nobre et al. 1996 belongs to a thermophilic genus whose members share relatively low degrees of 16S rRNA gene sequence similarity. Meiothermus constitutes an evolutiona...

    Authors: Johannes Sikorski, Brian J. Tindall, Stephen Lowry, Susan Lucas, Matt Nolan, Alex Copeland, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Cliff Han, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati…

    Citation: Standards in Genomic Sciences 2010 3:3010037

    Content type: OriginalPaper

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  28. Meiothermus ruber (Loginova et al. 1984) Nobre et al. 1996 is the type species of the genus Meiothermus. This thermophilic genus is of special interest, as its members share relatively low degrees of 16S rRNA gen...

    Authors: Brian J. Tindall, Johannes Sikorski, Susan Lucas, Eugene Goltsman, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan-Fang Cheng, Cliff Han, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati…

    Citation: Standards in Genomic Sciences 2010 3:3010026

    Content type: OriginalPaper

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  29. Cellulomonas flavigena (Kellerman and McBeth 1912) Bergey et al. 1923 is the type species of the genus Cellulomonas of the actinobacterial family Cellulomonadaceae. Members of the genus Cellulomonas are of specia...

    Authors: Birte Abt, Brian Foster, Alla Lapidus, Alicia Clum, Hui Sun, Rüdiger Pukall, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan-Fang Cheng, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova…

    Citation: Standards in Genomic Sciences 2010 3:3010015

    Content type: OriginalPaper

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  30. Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococcus, and is of phylogenetic interest because of its isolated placement in a genomically little characterized region of the Fir...

    Authors: Yun-Juan Chang, Rüdiger Pukall, Elizabeth Saunders, Alla Lapidus, Alex Copeland, Matt Nolan, Tijana Glavina Del Rio, Susan Lucas, Feng Chen, Hope Tice, Jan-Fang Cheng, Cliff Han, John C. Detter, David Bruce, Lynne Goodwin, Sam Pitluck…

    Citation: Standards in Genomic Sciences 2010 3:3010001

    Content type: OriginalPaper

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  31. Authors: Alex Copeland, Johannes Sikorski, Alla Lapidus, Matt Nolan, Tijana Glavina Del Rio, Susan Lucas, Feng Chen, Hope Tice, Sam Pitluck, Jan-Fang Cheng, Rüdiger Pukall, Olga Chertkov, Thomas Brettin, Cliff Han, Cheryl Kuske, David Bruce…

    Citation: Standards in Genomic Sciences 2010 2:2030361

    Content type: Erratum

    Published on:

    The original article was published in Standards in Genomic Sciences 2009 1:Art11

  32. This report summarizes the M3 Workshop held at the January 2010 Pacific Symposium on Biocomputing. The workshop, organized by Genomic Standards Consortium members, included five contributed talks, a series of ...

    Authors: Lynette Hirschman, Peter Sterk, Dawn Field, John Wooley, Guy Cochrane, Jack Gilbert, Eugene Kolker, Nikos Kyrpides, Folker Meyer, Ilene Mizrachi, Yasukazu Nakamura, Susanna-Assunta Sansone, Lynn Schriml, Tatiana Tatusova, Owen White and Pelin Yilmaz

    Citation: Standards in Genomic Sciences 2010 2:2030357

    Content type: Report

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  33. Rhizobium leguminosarum bv trifolii is a soil-inhabiting bacterium that has the capacity to be an effective nitrogen fixing microsymbiont of a diverse range of annual Trifolium (clover) species. Strain WSM1325 is...

    Authors: Wayne Reeve, Graham O’Hara, Patrick Chain, Julie Ardley, Lambert Bräu, Kemanthi Nandesena, Ravi Tiwari, Alex Copeland, Matt Nolan, Cliff Han, Thomas Brettin, Miriam Land, Galina Ovchinikova, Natalia Ivanova, Konstantinos Mavromatis, Victor Markowitz…

    Citation: Standards in Genomic Sciences 2010 2:2030347

    Content type: OriginalPaper

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  34. Archaeoglobus profundus (Burggraf et al. 1990) is a hyperthermophilic archaeon in the euryarchaeal class Archaeoglobi, which is currently represented by the single family Archaeoglobaceae, containing six validly ...

    Authors: Mathias von Jan, Alla Lapidus, Tijana Glavina Del Rio, Alex Copeland, Hope Tice, Jan-Fang Cheng, Susan Lucas, Feng Chen, Matt Nolan, Lynne Goodwin, Cliff Han, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova…

    Citation: Standards in Genomic Sciences 2010 2:2030327

    Content type: OriginalPaper

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  35. Thermobispora bispora (Henssen 1957) Wang et al. 1996 is the type species of the genus Thermobispora. This genus is of great interest because it is strictly thermophilic and because it has been shown for several ...

    Authors: Konstantinos Liolios, Johannes Sikorski, Marlen Jando, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Hope Tice, Jan-Fang Cheng, Cliff Han, Tanja Woyke, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis…

    Citation: Standards in Genomic Sciences 2010 2:2030318

    Content type: OriginalPaper

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  36. Gluconacetobacter diazotrophicus PAl 5 is of agricultural significance due to its ability to provide fixed nitrogen to plants. Consequently, its genome sequence has been eagerly anticipated to enhance understandi...

    Authors: Adriana Giongo, Heather L. Tyler, Ursula N. Zipperer and Eric W. Triplett

    Citation: Standards in Genomic Sciences 2010 2:2030309

    Content type: OriginalPaper

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  37. Arcobacter nitrofigilis (McClung et al. 1983) Vandamme et al. 1991 is the type species of the genus Arcobacter in the family Campylobacteraceae within the Epsilonproteobacteria. The species was first described in...

    Authors: Amrita Pati, Sabine Gronow, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Hope Tice, Jan-Fang Cheng, Cliff Han, Olga Chertkov, David Bruce, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios…

    Citation: Standards in Genomic Sciences 2010 2:2030300

    Content type: OriginalPaper

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  38. Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was...

    Authors: Konstantinos Mavromatis, Birte Abt, Evelyne Brambilla, Alla Lapidus, Alex Copeland, Shweta Deshpande, Matt Nolan, Susan Lucas, Hope Tice, Jan-Fang Cheng, Cliff Han, John C. Detter, Tanja Woyke, Lynne Goodwin, Sam Pitluck, Brittany Held…

    Citation: Standards in Genomic Sciences 2010 2:2030290

    Content type: OriginalPaper

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  39. Aminobacterium colombiense Baena et al. 1999 is the type species of the genus Aminobacterium. This genus is of large interest because of its isolated phylogenetic location in the family Synergistaceae, its strict...

    Authors: Olga Chertkov, Johannes Sikorski, Evelyne Brambilla, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Hope Tice, Jan-Fang Cheng, Cliff Han, John C. Detter, David Bruce, Roxanne Tapia, Lynne Goodwin, Sam Pitluck…

    Citation: Standards in Genomic Sciences 2010 2:2030280

    Content type: OriginalPaper

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  40. Denitrovibrio acetiphilus Myhr and Torsvik 2000 is the type species of the genus Denitrovibrio in the bacterial family Deferribacteraceae. It is of phylogenetic interest because there are only six genera describe...

    Authors: Hajnalka Kiss, Elke Lang, Alla Lapidus, Alex Copeland, Matt Nolan, Tijana Glavina Del Rio, Feng Chen, Susan Lucas, Hope Tice, Jan-Fang Cheng, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Amrita Pati, Natalia Ivanova…

    Citation: Standards in Genomic Sciences 2010 2:2030270

    Content type: OriginalPaper

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  41. Brachyspira murdochii Stanton et al. 1992 is a non-pathogenic, host-associated spirochete of the family Brachyspiraceae. Initially isolated from the intestinal content of a healthy swine, the ‘group B spirochaete...

    Authors: Amrita Pati, Johannes Sikorski, Sabine Gronow, Christine Munk, Alla Lapidus, Alex Copeland, Tijana Glavina Del Tio, Matt Nolan, Susan Lucas, Feng Chen, Hope Tice, Jan-Fang Cheng, Cliff Han, John C. Detter, David Bruce, Roxanne Tapia…

    Citation: Standards in Genomic Sciences 2010 2:2030260

    Content type: OriginalPaper

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  42. Thermosphaera aggregans Huber et al. 1998 is the type species of the genus Thermosphaera, which comprises at the time of writing only one species. This species represents archaea with a hyperthermophilic, heterot...

    Authors: Stefan Spring, Reinhard Rachel, Alla Lapidus, Karen Davenport, Hope Tice, Alex Copeland, Jan-Fang Cheng, Susan Lucas, Feng Chen, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova…

    Citation: Standards in Genomic Sciences 2010 2:2030245

    Content type: OriginalPaper

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  43. Quantitative or numerical metrics of protein function specificity made possible by the Gene Ontology are useful in that they enable development of distance or similarity measures between protein functions. Her...

    Authors: Brenton Louie, Silas Bergen, Roger Higdon and Eugene Kolker

    Citation: Standards in Genomic Sciences 2010 2:2020238

    Content type: OriginalPaper

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  44. Authors: Alicia Clum, Brian J. Tindall, Johannes Sikorski, Natalia Ivanova, Konstantinos Mavromatis, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Feng Chen, Hope Tice, Sam Pitluck, Jan-Fang Cheng, Olga Chertkov, Thomas Brettin, Cliff Han, John C. Detter…

    Citation: Standards in Genomic Sciences 2010 2:2020228

    Content type: Erratum

    Published on:

    The original article was published in Standards in Genomic Sciences 2009 1:Art13

  45. Sebaldella termitidis (Sebald 1962) Collins and Shah 1986, is the only species in the genus Sebaldella within the fusobacterial family ‘Leptotrichiaceae’. The sole and type strain of the species was first isolate...

    Authors: Miranda Harmon-Smith, Laura Celia, Olga Chertkov, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Hope Tice, Jan-Fang Cheng, Cliff Han, John C. Detter, David Bruce, Lynne Goodwin, Sam Pitluck, Amrita Pati…

    Citation: Standards in Genomic Sciences 2010 2:2020220

    Content type: OriginalPaper

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  46. Spirosoma linguale Migula 1894 is the type species of the genus. S. linguale is a free-living and non-pathogenic organism, known for its peculiar ringlike and horseshoe-shaped cell morphology. Here we describe th...

    Authors: Kathleen Lail, Johannes Sikorski, Elizabeth Saunders, Alla Lapidus, Tijana Glavina Del Rio, Alex Copeland, Hope Tice, Jan-Fang Cheng, Susan Lucas, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova…

    Citation: Standards in Genomic Sciences 2010 2:2020176

    Content type: OriginalPaper

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  47. Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful e...

    Authors: Natalia Ivanova, Johannes Sikorski, Marlen Jando, Christine Munk, Alla Lapidus, Tijana Glavina Del Rio, Alex Copeland, Hope Tice, Jan-Fang Cheng, Susan Lucas, Feng Chen, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Konstantinos Mavromatis…

    Citation: Standards in Genomic Sciences 2010 2:2020158

    Content type: OriginalPaper

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  48. Sulfurospirillum deleyianum Schumacher et al. 1993 is the type species of the genus Sulfurospirillum. S. deleyianum is a model organism for studying sulfur reduction and dissimilatory nitrate reduction as an ener...

    Authors: Johannes Sikorski, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Feng Chen, Hope Tice, Jan-Fang Cheng, Elizabeth Saunders, David Bruce, Lynne Goodwin, Sam Pitluck, Galina Ovchinnikova, Amrita Pati, Natalia Ivanova…

    Citation: Standards in Genomic Sciences 2010 2:2020149

    Content type: OriginalPaper

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