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Table 4. Number of genes associated with the 21 general COG functional categories

From: Complete genome sequence of Marinobacter adhaerens type strain (HP15), a diatom-interacting marine microorganism

Code Value %agea Description
J 162 3.7 Translation
A 0 0 RNA processing and modification
K 161 3.6 Transcription
L 132 3 Replication, recombination and repair
B 0 0 Chromatin structure and dynamics
D 32 0.7 Cell cycle control, mitosis and meiosis
Y 0 0 Nuclear structure
V 0 0 Defense mechanisms
T 199 4.5 Signal transduction mechanisms
M 151 3.4 Cell wall/membrane biogenesis
N 166 3.8 Cell motility
Z 0 0 Cytoskeleton
W 0 0 Extracellular structures
U 0 0 Intracellular trafficking and secretion
O 127 2.9 Posttranslational modification, protein turnover, chaperones
C 192 4.3 Energy production and conversion
G 82 1.9 Carbohydrate transport and metabolism
E 254 5.7 Amino acid transport and metabolism
F 51 1.1 Nucleotide transport and metabolism
H 97 2.2 Coenzyme transport and metabolism
I 141 3.2 Lipid transport and metabolism
P 138 3.1 Inorganic ion transport and metabolism
Q 76 1.7 Secondary metabolites biosynthesis, transport and catabolism
R 330 7.5 General function prediction only
S 251 5.7 Function unknown
- 285 6.4 multiple COGs
  3,027 68.6 Total
- 1,383 31.4 Not in COGs
  1. a) The total is based on the total number of protein coding genes in the annotated genome