Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Arcobacter nitrofigilis type strain (CIT)
Code | value | %age | Description |
|---|---|---|---|
J | 143 | 5.4 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 157 | 5.9 | Transcription |
L | 102 | 3.9 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 16 | 0.6 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 37 | 1.4 | Defense mechanisms |
T | 267 | 10.1 | Signal transduction mechanisms |
M | 168 | 6.3 | Cell wall/membrane/envelope biogenesis |
N | 78 | 3.0 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 69 | 2.6 | Intracellular trafficking and secretion |
O | 103 | 3.9 | Posttranslational modification, protein turnover, chaperones |
C | 212 | 8.0 | Energy production and conversion |
G | 114 | 4.3 | Carbohydrate transport and metabolism |
E | 252 | 9.5 | Amino acid transport and metabolism |
F | 61 | 2.3 | Nucleotide transport and metabolism |
H | 128 | 4.8 | Coenzyme transport and metabolism |
I | 57 | 2.2 | Lipid transport and metabolism |
P | 159 | 6.0 | Inorganic ion transport and metabolism |
Q | 38 | 1.4 | Secondary metabolites biosynthesis, transport and catabolism |
R | 288 | 10.9 | General function prediction only |
S | 199 | 7.5 | Function unknown |
- | 861 | 26.1 | Not in COGs |