Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460T)
Code | value | %age | Description |
|---|---|---|---|
J | 145 | 5.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 147 | 5.8 | Transcription |
L | 180 | 7.1 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 23 | 0.9 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 46 | 1.8 | Defense mechanisms |
T | 257 | 10.2 | Signal transduction mechanisms |
M | 155 | 6.2 | Cell wall/membrane/envelope biogenesis |
N | 103 | 4.1 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 74 | 2.9 | Intracellular trafficking and secretion |
O | 89 | 3.5 | Posttranslational modification, protein turnover, chaperones |
C | 220 | 8.7 | Energy production and conversion |
G | 92 | 3.7 | Carbohydrate transport and metabolism |
E | 182 | 7.2 | Amino acid transport and metabolism |
F | 62 | 2.5 | Nucleotide transport and metabolism |
H | 126 | 5.0 | Coenzyme transport and metabolism |
I | 47 | 1.9 | Lipid transport and metabolism |
P | 140 | 5.6 | Inorganic ion transport and metabolism |
Q | 20 | 0.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 263 | 10.4 | General function prediction only |
S | 148 | 5.9 | Function unknown |
- | 798 | 25.9 | Not in COGs |